CDS

Accession Number TCMCG006C120891
gbkey CDS
Protein Id XP_013642206.1
Location join(38936713..38937342,38938391..38938906)
Gene LOC106347235
GeneID 106347235
Organism Brassica napus

Protein

Length 381aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA293435
db_source XM_013786752.2
Definition metalloendoproteinase 2-MMP isoform X2 [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category O
Description Zinc-dependent metalloprotease
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko01002        [VIEW IN KEGG]
KEGG_ko ko:K07761        [VIEW IN KEGG]
ko:K07999        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0001101        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004175        [VIEW IN EMBL-EBI]
GO:0004222        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0006508        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006970        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008233        [VIEW IN EMBL-EBI]
GO:0008237        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009651        [VIEW IN EMBL-EBI]
GO:0009719        [VIEW IN EMBL-EBI]
GO:0009725        [VIEW IN EMBL-EBI]
GO:0009753        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010035        [VIEW IN EMBL-EBI]
GO:0010038        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0031224        [VIEW IN EMBL-EBI]
GO:0031225        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0040007        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044425        [VIEW IN EMBL-EBI]
GO:0046686        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048580        [VIEW IN EMBL-EBI]
GO:0048583        [VIEW IN EMBL-EBI]
GO:0048589        [VIEW IN EMBL-EBI]
GO:0048831        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050793        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051093        [VIEW IN EMBL-EBI]
GO:0051239        [VIEW IN EMBL-EBI]
GO:0051241        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070011        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0080186        [VIEW IN EMBL-EBI]
GO:0140096        [VIEW IN EMBL-EBI]
GO:1900055        [VIEW IN EMBL-EBI]
GO:1900056        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901700        [VIEW IN EMBL-EBI]
GO:1905622        [VIEW IN EMBL-EBI]
GO:2000024        [VIEW IN EMBL-EBI]
GO:2000026        [VIEW IN EMBL-EBI]
GO:2000028        [VIEW IN EMBL-EBI]
GO:2000241        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGAGGTTTTGCGTTTTCGGGTTTCTATCGTTATTCCTAATCATTTCTCCCGTCTCCGCATGGTTCTTCCCCAACTCCACCGCCATTCCACCCTCTCTACGTAACACCACACGCGTTTTCTGGGACGCCTTCTCCAATTTCACCGGCTGTCACCACGGCCAAAACGTCGACGGTCTCTTCCGCATCAAAAAATACTTCCAACGCTTTGGTTACATCCCGGAGACGTATTCAGGCAACTTCACAGATGATTTCGATGACATCTTAAAAAACGCCGTGGAGTTGTACCAAAAGAATTTCCGGTTAAACGTAACCGGAGAGCTCGACGCGTTAACCATTAAACACATCGTGGTTCCTCGTTGCGGCAACCCGGACGTTGTCAACGGTACGTCGCTGATGCACAACGGAAGAAGAAAGACTTTCGAAGTCAACTTCTCCCCCGGCGGCAAGGTGCCTCGTTTGCACACGGTCAAACACTACACGCTTTTCCCCGGCGAGCCACGGTGGCCGAGAGACCGCCGTGACTTGACCTACGCCTTCGACCCGAGAAACCCGTTGACCGACGAGGTCAAGAGCGTGTTCGCGCGCGCGTTCGGACGCTGGTCGGACGTCACAGCGCTGAACTTCACGAACATCGAGTCTTTCACGACCTCCGACATCACGATCGGATTCTACACCGGCGACCACGGCGACGGGGAGCCTTTCGACGGCGTGTTGGGCACGCTGGCTCACGCTTTCTCGCCTCCGAGCGGGAAGTTCCATCTCGACGCTGACGAGAACTGGGTTGTCTCCGGAGACCTCGACAGCTTCCTCTCCGTCACGGCGGCGGTTGATCTTGAGTCGGTGGCGGTTCACGAGATCGGTCATCTTCTTGGTTTGGGACATTCATCTGTGGAGGAGTCGATCATGTATCCGACGATCACGACGGGGAAACGTAAAGTTGACTTGACGAGTGATGACGTGGAAGGGATCCAGTACTTGTACGATGCTAATCCTAATTTTAACGGCACGTCTCCGCCGGCCGCCACCACTCGGGAACGAGATACTGGTAGCTTTGGTGCGGCCGTGAGAATCGACGGTTCATCCAGGATGACGAGTTTAAGTCTTTTGTTATCAACCGTCGGATTGTTCTTGTGGTTATTACCGTAG
Protein:  
MRFCVFGFLSLFLIISPVSAWFFPNSTAIPPSLRNTTRVFWDAFSNFTGCHHGQNVDGLFRIKKYFQRFGYIPETYSGNFTDDFDDILKNAVELYQKNFRLNVTGELDALTIKHIVVPRCGNPDVVNGTSLMHNGRRKTFEVNFSPGGKVPRLHTVKHYTLFPGEPRWPRDRRDLTYAFDPRNPLTDEVKSVFARAFGRWSDVTALNFTNIESFTTSDITIGFYTGDHGDGEPFDGVLGTLAHAFSPPSGKFHLDADENWVVSGDLDSFLSVTAAVDLESVAVHEIGHLLGLGHSSVEESIMYPTITTGKRKVDLTSDDVEGIQYLYDANPNFNGTSPPAATTRERDTGSFGAAVRIDGSSRMTSLSLLLSTVGLFLWLLP